Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015800981.1_cds_XP_016472459.1_6435
CDS Infomation

[gene=LOC107794476] [db_xref=GeneID:107794476] [protein=1-aminocyclopropane-1-carboxylate oxidase homolog] [protein_id=XP_016472459.1] [location=complement(join(10075..10326,11312..11633,13160..13731))] [gbkey=CDS]
Sequence

ATGGCTTATATACATTCAATATACAAAATGGTTGTTTCAAACACACAACAAATTCAGGAA
AATTTCCCACAAAACTATGATAAAAACAGTGAACTTAAAGCCTTTGATGACACAAAAGCC
GGTGTCAAAGGCCTCGTTGATGCTGGAATTACTGAAGTACCTCGGATATTCATCCATCCA
GAGGGTTCGGGGAAGTCCCCGAGCCTCGAGGAAAAACATTTTATTTTTCCATTTATAGAC
CTTGAAAACATGAACAATGATCTTGTCAAGCACAAAGAGATGGTTAAACAAATTGGAGAT
GCATCAGAGACATGGGGTTTCTTTCAAGTGATCAATCATGGTATTCCAGTGTCCGTCCTG
GACGAAATGTTGCGAGGAGCACGTCGTTTTTTTGAGCAAGATATTGAAATTAAAAAGCAA
TATTACCATAGAGATTATACACAGAGGGTGGCTTATAATAGCAATTTTGATCTGTATAGT
CCTAAAGCTATATCAGTAAATTGGAGTGACTCACTTTATTCCACAATGGGTCCTGATCCT
CTTAACCCTGAGGAATTGCCTGAGGCATGCAGGGAAATAACAATGGAGTACTCACATCAT
GTAGAGAAAATGGGGTGCACTTTGCTTGAGTTAATGTCAGAGTCTCTTGGTCTAAAACCA
AGCCATCTCAACGAAATGGAATGTTCTGAGGGTCTTAGCATTTTGTGCAATTACTACCCA
GCATGTCCACAGCCAGAACTAGTTATAGGCCTCAGCAAACATACAGACAATGACTTCTTC
ACTGTCCTTTTGCAAGACGATCTCGGCGGCCTCCAAGTTCTTCACCAGAATCAATGGGTT
GATGTTCCTCCTACACCTGGAGCTTTAGTGATCAATATTGGCGACGTTCTCCACCTCATA
TCAAATGACAAGTACAAAAGTGTAGAGCATAGAGCATTGTCAAAAAAAGTTGGTCCAAGA
ATATCTATAGCAAGCTTCTTCAGTTCAGGGCCATTGCCATCTTCCAGATTGTATGGGCCA
ATTGAGGAGCTGTTATCAGAAGAGAATCCTCCAAAGTATCGCGCAACTACATTGAAGGAA
TTCTATGACTATTTCAGCCAGGAAGGGCTTGATGGGACTTCCAATCTGTCTCATCTCAGA
ATCTAA

Peptide Sequence

PEP ID

XP_016472459.1
PEP Infomation

PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog [Nicotiana tabacum]
Sequence

MAYIHSIYKMVVSNTQQIQENFPQNYDKNSELKAFDDTKAGVKGLVDAGITEVPRIFIHP
EGSGKSPSLEEKHFIFPFIDLENMNNDLVKHKEMVKQIGDASETWGFFQVINHGIPVSVL
DEMLRGARRFFEQDIEIKKQYYHRDYTQRVAYNSNFDLYSPKAISVNWSDSLYSTMGPDP
LNPEELPEACREITMEYSHHVEKMGCTLLELMSESLGLKPSHLNEMECSEGLSILCNYYP
ACPQPELVIGLSKHTDNDFFTVLLQDDLGGLQVLHQNQWVDVPPTPGALVINIGDVLHLI
SNDKYKSVEHRALSKKVGPRISIASFFSSGPLPSSRLYGPIEELLSEENPPKYRATTLKE
FYDYFSQEGLDGTSNLSHLRI

Transcript Sequence

Gene sequence data has not been registered.